| handleReservedTags(GFFStreamFeature, String, Qualifier, Qualifier) |  | 0% |  | 0% | 32 | 32 | 102 | 102 | 1 | 1 |
| editKeyAndQualifiers(QualifierVector, QualifierVector, Key, Key, GFFStreamFeature, int) |  | 0% |  | 0% | 34 | 34 | 104 | 104 | 1 | 1 |
| addReservedTag(String, String, String, GFFStreamFeature, StringVector, StringVector, boolean) |  | 0% |  | 0% | 22 | 22 | 82 | 82 | 1 | 1 |
| featureChanged(FeatureChangeEvent) |  | 0% |  | 0% | 30 | 30 | 94 | 94 | 1 | 1 |
| updateFeature(GFFStreamFeature, String, Qualifier, Qualifier) |  | 0% |  | 0% | 26 | 26 | 81 | 81 | 1 | 1 |
| getFeatureCvTerm(String, String, String, GFFStreamFeature) |  | 0% |  | 0% | 28 | 28 | 84 | 84 | 1 | 1 |
| insertFeature(Feature) |  | 0% |  | 0% | 17 | 17 | 84 | 84 | 1 | 1 |
| insertFeatureSegment(FeatureSegment, String) |  | 0% |  | 0% | 15 | 15 | 66 | 66 | 1 | 1 |
| loadDbXRefsAndPubs(String, FeatureCvTerm) |  | 0% |  | 0% | 11 | 11 | 45 | 45 | 1 | 1 |
| entryChanged(EntryChangeEvent) |  | 0% |  | 0% | 14 | 14 | 52 | 52 | 1 | 1 |
| getFeatureLoc(GFFStreamFeature, String, Range) |  | 0% |  | 0% | 13 | 13 | 43 | 43 | 1 | 1 |
| updateHistory(GFFStreamFeature, String) |  | 0% |  | 0% | 9 | 9 | 37 | 37 | 1 | 1 |
| processFeatureProp(GFFStreamFeature, String, String, int, int, String, Integer) |  | 0% |  | 0% | 5 | 5 | 23 | 23 | 1 | 1 |
| deleteFeature(String, String, GFFStreamFeature) |  | 0% |  | 0% | 10 | 10 | 32 | 32 | 1 | 1 |
| segmentNumberChanged(GFFStreamFeature, RangeVector, RangeVector) |  | 0% |  | 0% | 8 | 8 | 32 | 32 | 1 | 1 |
| processFeatureRelationshipRank(GFFStreamFeature, RangeVector, int) |  | 0% |  | 0% | 5 | 5 | 30 | 30 | 1 | 1 |
| sequenceChanged(SequenceChangeEvent) |  | 0% |  | 0% | 4 | 4 | 25 | 25 | 1 | 1 |
| addQualifiers(QualifierVector, Feature, GFFStreamFeature, String) |  | 0% |  | 0% | 10 | 10 | 28 | 28 | 1 | 1 |
| deleteFeatureRelationShip(String, String, String, GFFStreamFeature) |  | 0% | | n/a | 1 | 1 | 23 | 23 | 1 | 1 |
| static {...} |  | 0% | | n/a | 1 | 1 | 13 | 13 | 1 | 1 |
| updateFeatureLoc(GFFStreamFeature, String) |  | 0% |  | 0% | 3 | 3 | 22 | 22 | 1 | 1 |
| deletePolypetideDomains(GFFStreamFeature, Feature) |  | 0% |  | 0% | 7 | 7 | 22 | 22 | 1 | 1 |
| deleteSimilarity(String, GFFStreamFeature) |  | 0% |  | 0% | 3 | 3 | 19 | 19 | 1 | 1 |
| commit(DatabaseDocument, boolean, ChadoTransactionManager) |  | 0% |  | 0% | 9 | 9 | 20 | 20 | 1 | 1 |
| initCV() |  | 0% |  | 0% | 3 | 3 | 9 | 9 | 1 | 1 |
| getFeatureDbXRef(String, String) |  | 0% |  | 0% | 2 | 2 | 17 | 17 | 1 | 1 |
| getFeatureSynonym(String, String, String) |  | 0% |  | 0% | 3 | 3 | 19 | 19 | 1 | 1 |
| getCvTerm(String, String) |  | 0% |  | 0% | 4 | 4 | 12 | 12 | 1 | 1 |
| isSynonymTag(String, GFFStreamFeature) |  | 0% |  | 0% | 7 | 7 | 16 | 16 | 1 | 1 |
| isRemovingDuplicateQualifiers(int, StringVector, StringVector, String) |  | 0% |  | 0% | 7 | 7 | 13 | 13 | 1 | 1 |
| getCvTerm(String, String, String, String) |  | 0% |  | 0% | 3 | 3 | 14 | 14 | 1 | 1 |
| createCvTerm(String, String, String) |  | 0% | | n/a | 1 | 1 | 5 | 5 | 1 | 1 |
| getFeatureInsertUpdate() |  | 0% |  | 0% | 6 | 6 | 12 | 12 | 1 | 1 |
| getFeatureProp(String, String, Integer, int) |  | 0% | | n/a | 1 | 1 | 10 | 10 | 1 | 1 |
| updateResidueColumn(ChadoTransaction) |  | 0% |  | 0% | 3 | 3 | 8 | 8 | 1 | 1 |
| synchColourInGeneModel(GFFStreamFeature, String, Qualifier) |  | 0% | | n/a | 1 | 1 | 10 | 10 | 1 | 1 |
| getFeaturePub(String, String) |  | 0% | | n/a | 1 | 1 | 8 | 8 | 1 | 1 |
| getSql() |  | 0% |  | 0% | 2 | 2 | 4 | 4 | 1 | 1 |
| stripQuotes(String) |  | 0% |  | 0% | 4 | 4 | 5 | 5 | 1 | 1 |
| getFeatureCvTermPropRank(List, String) |  | 0% |  | 0% | 3 | 3 | 6 | 6 | 1 | 1 |
| isReservedTag(String) |  | 0% |  | 0% | 3 | 3 | 4 | 4 | 1 | 1 |
| isCvTag(String) |  | 0% |  | 0% | 3 | 3 | 4 | 4 | 1 | 1 |
| isSpecialTag(String) |  | 0% |  | 0% | 4 | 4 | 3 | 3 | 1 | 1 |
| addHistory(ChadoTransaction, String, String) |  | 0% |  | 0% | 2 | 2 | 4 | 4 | 1 | 1 |
| logMDC() |  | 0% | | n/a | 1 | 1 | 4 | 4 | 1 | 1 |
| ChadoTransactionManager() |  | 0% | | n/a | 1 | 1 | 3 | 3 | 1 | 1 |
| hasTransactions() |  | 0% |  | 0% | 2 | 2 | 3 | 3 | 1 | 1 |
| getTransactionAt(int) |  | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setEntryGroup(EntryGroup) | | 0% | | n/a | 1 | 1 | 2 | 2 | 1 | 1 |
| getTransactionCount() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setSql(Vector) | | 0% | | n/a | 1 | 1 | 2 | 2 | 1 | 1 |
| getSynonymTags() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| getCommitReturnValue() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |